理学部

Shunrou Tokonami

  (床次 俊郎)

Profile Information

Affiliation
Assistant Professor, Faculty of Science Department of Chemistry, Gakushuin University
Degree
Bachelor of Science(Mar, 2016, Kobe University)
Master of Science(Mar, 2018, Kyoto University)

Contact information
shunrou.tokonamigakushuin.ac.jp
Researcher number
40981535
ORCID ID
 https://orcid.org/0000-0001-8487-6613
J-GLOBAL ID
202301007995366048
researchmap Member ID
R000054803

Papers

 6
  • Yusuke Nakasone, Hiroto Murakami, Shunrou Tokonami, Takashi Oda, Masahide Terazima
    Journal of Biological Chemistry, 105285-105285, Sep, 2023  Peer-reviewed
    Photoactivated adenylate cyclases (PACs) are multidomain BLUF proteins that regulate the cellular levels of cyclic adenosine 3',5'-monophosphate (cAMP) in a light-dependent manner. The signaling route and dynamics of PAC from Oscillatoria acuminata (OaPAC), which consists of a light sensor BLUF domain, an adenylate cyclase domain, and a connector helix (α3-helix), were studied by detecting conformational changes in the protein moiety. Although circular dichroism and small-angle X-ray scattering measurements did not show significant changes upon light illumination, the transient grating method successfully detected light-induced changes in the diffusion coefficient (diffusion-sensitive conformational change (DSCC)) of full-length OaPAC (FL-PAC) and the BLUF domain with the α3-helix. DSCC of FL-PAC was observed only when both protomers in a dimer were photoconverted. This light intensity dependence suggests that OaPAC is a cyclase with a nonlinear light intensity response. The enzymatic activity indeed nonlinearly depends on light intensity, that is, OaPAC is activated under strong light conditions. It was also found that both DSCC and enzymatic activity were suppressed by a mutation in the W90 residue, indicating the importance of the highly conserved Trp in many BLUF domains for the function. Based on these findings, a reaction scheme was proposed together with the reaction dynamics.
  • Shunrou Tokonami, Yusuke Nakasone, Masahide Terazima
    Protein Science, 32(6), Jun, 2023  Peer-reviewedLead author
  • Shunrou Tokonami, Morihiko Onose, Yusuke Nakasone, Masahide Terazima
    Journal of the American Chemical Society, 144(9) 4080-4090, Mar 9, 2022  Peer-reviewedLead author
  • Kaoru Ohta, Shunrou Tokonami, Kotaro Takahashi, Yuto Tamura, Hiroko Yamada, Keisuke Tominaga
    The Journal of Physical Chemistry B, 121(43) 10157-10165, Nov 2, 2017  Peer-reviewed
  • Jessica Afalla, Kaoru Ohta, Shunrou Tokonami, Elizabeth Ann Prieto, Gerald Angelo Catindig, Karl Cedric Gonzales, Rafael Jaculbia, John Daniel Vasquez, Arm, o Somintac, Arnel Salvador, Elmer Estacio, Masahiko Tani, Keisuke Tominaga
    Japanese Journal of Applied Physics, 56(11) 111203-111203, Nov 1, 2017  Peer-reviewed

Teaching Experience

 3