CVClient

床次 俊郎

トコナミ シュンロウ  (Shunrou Tokonami)

基本情報

所属
学習院大学 理学部 化学科 助教
学位
学士(理学)(2016年3月 神戸大学)
修士(理学)(2018年3月 京都大学)
博士(理学)(2024年3月 京都大学)

連絡先
shunrou.tokonamigakushuin.ac.jp
研究者番号
40981535
ORCID ID
 https://orcid.org/0000-0001-8487-6613
J-GLOBAL ID
202301007995366048
researchmap会員ID
R000054803

経歴

 1

学歴

 2

論文

 7
  • Tadayuki Tokashiki, Takatoshi Ohata, Shunrou Tokonami, Takashi Oda, Yusuke Nakasone, Masahide Terazima
    2025年5月29日  
    Abstract The Orange Carotenoid Protein (OCP) is a blue-green light sensor that regulates non-photochemical quenching (NPQ) in cyanobacteria through reversible transitions between its dark-adapted (OCPO) and light-adapted (OCPR) states. Despite extensive studies, the detailed reaction scheme remains unclear. In this study, we examined the photo-induced reaction dynamics of OCP using size-exclusion chromatography (SEC), small-angle X-ray scattering (SAXS), and transient grating (TG) spectroscopy. We found that OCPOand OCPRexist in monomer–dimer equilibria, with OCPRforming more stable and elongated dimers. TG measurements revealed that upon photoexcitation, OCPOmonomers undergo two structural transitions before associating into OCPRdimers. In contrast, OCPOdimers dissociate prior to the structural rearrangement, highlighting a fundamental difference in their reaction pathways. Moreover, dimerization was found to moderately reduce the photo-reactivity of OCPOcompared to the monomer. We also found that apo-OCP readily forms heterodimers with OCPR, potentially altering reaction pathways and masking true kinetic behavior.
  • Yusuke Nakasone, Hiroto Murakami, Shunrou Tokonami, Takashi Oda, Masahide Terazima
    Journal of Biological Chemistry 105285-105285 2023年9月  査読有り
    Photoactivated adenylate cyclases (PACs) are multidomain BLUF proteins that regulate the cellular levels of cyclic adenosine 3',5'-monophosphate (cAMP) in a light-dependent manner. The signaling route and dynamics of PAC from Oscillatoria acuminata (OaPAC), which consists of a light sensor BLUF domain, an adenylate cyclase domain, and a connector helix (α3-helix), were studied by detecting conformational changes in the protein moiety. Although circular dichroism and small-angle X-ray scattering measurements did not show significant changes upon light illumination, the transient grating method successfully detected light-induced changes in the diffusion coefficient (diffusion-sensitive conformational change (DSCC)) of full-length OaPAC (FL-PAC) and the BLUF domain with the α3-helix. DSCC of FL-PAC was observed only when both protomers in a dimer were photoconverted. This light intensity dependence suggests that OaPAC is a cyclase with a nonlinear light intensity response. The enzymatic activity indeed nonlinearly depends on light intensity, that is, OaPAC is activated under strong light conditions. It was also found that both DSCC and enzymatic activity were suppressed by a mutation in the W90 residue, indicating the importance of the highly conserved Trp in many BLUF domains for the function. Based on these findings, a reaction scheme was proposed together with the reaction dynamics.
  • Shunrou Tokonami, Yusuke Nakasone, Masahide Terazima
    Protein Science 32(6) 2023年6月  査読有り筆頭著者
  • Shunrou Tokonami, Morihiko Onose, Yusuke Nakasone, Masahide Terazima
    Journal of the American Chemical Society 144(9) 4080-4090 2022年3月9日  査読有り筆頭著者
  • Kaoru Ohta, Shunrou Tokonami, Kotaro Takahashi, Yuto Tamura, Hiroko Yamada, Keisuke Tominaga
    The Journal of Physical Chemistry B 121(43) 10157-10165 2017年11月2日  査読有り

教育業績(担当経験のある科目)

 3